Data on genome resequencing and grain quality traits of the rice cultivar mahsuri and its blast-resistant mutant line, mahsuri mutant. Social Science Research Network, 52 (109974): 4560826. pp. 1-5. ISSN 2352-3409 (2023)
Abstract
Mutation breeding effort in Malaysia is constrained by limited access to useful genomic information about mutant lines. Hence, we conducted genome resequencing of blast resistant with kernel-related traits in mutant line, Mahsuri Mutant, and its parental line, Mahsuri using Illumina Novaseq 6000 sequencing platform with 30x sequencing coverage. The study is aimed to accelerate the detection of the causal mutation in the genomic sequence prior to the discovery and annotation of candidate variants of single nucleotide polymorphisms (SNPs). The discovery of SNPs will be beneficial to be employed in the development of functional SNP markers related to blast resistance and kernel-related traits. The genome sequence data (FASTQ format) of the parental and mutant lines have been deposited into the National Center for Biotechnology Information (NCBI) database under sequence read archive (SRA) with accession number SRR24388814 (Mahsuri) and SRR22952097 (Mahsuri Mutant) respectively.
| Item Type: | Article |
|---|---|
| Keywords: | Mahsuri, Mahsuri mutant, Genome resequencing |
| Taxonomy: | By Niche > Genome > Plant Genome Mapping By Niche > Genome > Plant Genomes |
| Collections: | Niche > Genome |
| Depositing User: | Muhamad Nasir Roslan KPA |
| Date Deposited: | 30 Jul 2026 04:28 |
| Last Modified: | 30 Jul 2026 04:28 |
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